In Migori county Rapogi and Kanyawanga lead in the list of top and best Extra County schools the County. This pertains to their performance in the Kenya Certificate of Secondary Education, KCSE, examinations.
Extra County Schools in Kenya form the second tier of secondary schools; after National schools. They were formerly referred to as Provincial schools. These schools are distributed all over the Country with each county having its share. The schools admit students from all over the country. These schools are in 3 Categories i.e category 1 (C1), Category 2 (C2) and Category 3 (C3). The Schools are either of Mixed or single sex type.
 For all details about other schools in Kenya, please visit the link below;
Here are the Extra County Schools in Migori County:
| School Code | School Name | Category | Type | Cluster |
| 44707102 | MIGORI SECONDARY SCHOOL | Extra County | Boys | C1 |
| 44707105 | KADIKA GIRLS’ SECONDARY SCHOOL | Extra County | Girls | C1 |
| 44707106 | NYABISAWA GIRLS SECONDARY SCHOOL | Extra County | Girls | C1 |
| 44708101 | TARANG’ANYA BOYS HIGH SCHOOL | Extra County | Boys | C1 |
| 44708102 | IKEREGE MIXED SECONDARY SCHOOL | Extra County | Mixed | C2 |
| 44717101 | KANYAWANGA SECONDARY SCHOOL | Extra County | Boys | C1 |
| 44717102 | KODEROBARA SECONDARY SCHOOL | Extra County | Boys | C1 |
| 44717107 | OYUGI OGANGO GIRLS’ SECONDARY SCHOOL | Extra County | Girls | C2 |
| 44717108 | KANGESO SECONDARY SCHOOL | Extra County | Boys | C2 |
| 44718202 | NYAROHA GIRLS SECONDARY SCHOOL | Extra County | Girls | C3 |
| 44729104 | SORI SECONDARY SCHOOL | Extra County | Boys | C1 |
| 44729106 | BANDE GIRLS SECONDARY SCHOOL | Extra County | Girls | C2 |
| 44736101 | ST JOSEPH’S RAPOGI SECONDARY SCHOOL | Extra County | Boys | C1 |
| 44736201 | BWARE SECONDARY SCHOOL | Extra County | Mixed | C2 |
| 44736203 | ST. PIUS URIRIÂ HIGH SCHOOL | Extra County | Boys | C1 |
| 44739103 | PE-HILL HIGH SCHOOL | Extra County | Boys | C3 |
| 44739104 | ST. ALBERT’S GIRLS HIGH SCHOOL, ULANDA | Extra County | Girls | C1 |
| 44739201 | ST. MARY GORRETY’S DEDE GIRLS SECONDARY SCHOOL | Extra County | Girls | C2 |
| 44744101 | ST PETER’S ABWAO SECONDARY SCHOOL | Extra County | Boys | C3 |
| 44744102 | MOI SUBA GIRLS SECONDARY SCHOOL | Extra County | Girls | C2 |
| 44748004 | ST MARY’S MABERA GIRLS SECONDARY SCHOOL | Extra County | Girls | C2 |
| 44748016 | ISIBANIA BOYS SECONDARY SCHOOL | Extra County | Boys | C1 |
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